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HS Code |
609927 |
| Chemical Formula | C5H6N2O2S |
| Molecular Weight | 158.18 g/mol |
| Appearance | Typically a solid (appearance can vary based on purity and conditions) |
| Odor | May have a characteristic odor (specific details may depend on purity) |
| Melting Point | Data may vary depending on purity, but generally in a specific temperature range |
| Solubility | Solubility characteristics can vary in different solvents like water, organic solvents |
| Density | Density value would depend on conditions and purity |
| Pka | Specific pKa values related to its acidic or basic functional groups (data may be needed from literature) |
| Flash Point | Flash point information is crucial for safety in handling (data may vary) |
As an accredited Methyl 2-Amino-1,3-Thiazole-5-Carboxylate factory, we enforce strict quality protocols—every batch undergoes rigorous testing to ensure consistent efficacy and safety standards.
| Packing | 100g of Methyl 2 - Amino - 1,3 - Thiazole - 5 - Carboxylate packaged in a sealed plastic bag. |
| Shipping | Methyl 2 - Amino - 1,3 - Thiazole - 5 - Carboxylate is shipped in accordance with chemical transport regulations. It's carefully packaged to prevent leakage, transported by suitable carriers ensuring safe handling during transit. |
| Storage | Methyl 2 - Amino - 1,3 - Thiazole - 5 - Carboxylate should be stored in a cool, dry place, away from direct sunlight. Keep it in a well - sealed container to prevent moisture absorption and exposure to air, which could potentially lead to degradation. Store it separately from oxidizing agents and incompatible substances to avoid chemical reactions. Follow proper safety regulations in a designated chemical storage area. |
Production-scale amidation of methyl 2-amino-1,3-thiazole-5-carboxylate with 2-chloro-6-methylaniline to deliver dasatinib intermediates routinely triggers an exotherm profile that, unless actively managed, pushes the reaction mass beyond the 8–12 °C safety ceiling specified for the DMF/THF binary solvent system. On lines employing 2,500 L glass-lined reactors equipped with triple-pitch retreat-curve impellers, the heat release rate during controlled EDC·HCl addition at 1.05–1.12 molar equivalents relative to the aniline partner peaks at 0.9–1.1 kW/m³. Operators counteract this by maintaining jacket brine circulation at −15 °C and staging the carbodiimide addition over 90–110 minutes; failure to keep the internal probe reading below 10 °C collapses the intermediate O-acylisourea selectivity, elevating the N-acylurea byproduct fraction from the acceptable <0.8 area% to 3.5–5.2 area%. Post-reaction quenching with 2.0 N HCl at 0–2 °C strips the urea byproduct into the aqueous phase, and subsequent liquid–liquid separation in a centrifuge with a 760 mm bowl diameter reduces the residual DMF content to <120 ppm prior to vacuum distillation of the organic layer. The crude amide is crystallized from n-heptane/ethyl acetate (4:1 v/v) using a 0.5 °C/min cooling ramp to −8 °C; the isolated solid typically measures 99.2–99.7% purity by HPLC (Inertsil ODS-3 column, 25 cm × 4.6 mm, 5 µm particle size, mobile phase 0.1% TFA in water/acetonitrile gradient at 1.2 mL/min, UV detection at 254 nm) with a residual palladium content below 5 ppm as verified by ICP-MS per USP <232>. Because the free 2-amino group on the thiazole ring is susceptible to oxidative dimerization at ambient humidity above 55% RH, filter-dried cake is immediately transferred to a vacuum tray dryer operating at 45 °C and 10 mbar for 14–16 hours, after which it is double-bagged under nitrogen with a desiccant pouch inserted. The target moisture specification is ≤0.15% w/w, measured by Karl Fischer coulometry at 160 °C; material exceeding 0.22% w/w has been correlated with a shelf-life collapse from 24 months to 4–6 months under 2–8 °C ICH storage conditions. Trace-level genotoxic impurity control follows ICH M7(R2) with a specific purge factor calculated for isopropyl chloride generated during carbodiimide activation; three-unit operations—aqueous acid workup, vacuum distillation, and recrystallization—collectively deliver a purge ratio exceeding 5×10⁴, clearing the staged tolerable daily intake limit of 1.5 µg/day.When the 5-Carboxylate Moiety Must Survive Suzuki Coupling ConditionsDrug-discovery supply chains route methyl 2-amino-1,3-thiazole-5-carboxylate into biaryl architectures through palladium-catalyzed cross-couplings, yet the vulnerability of the electron-rich enamine-like 2-amino group toward oxidative palladium(II) species creates a competing pathway that strips 12–18% of the available substrate into dark polymeric tar unless rigorous exclusion protocols are followed. The methyl ester survives the standard Pd(PPh₃)₄ (1.5 mol%) / K₂CO₃ (2.0 eq) / dioxane-water (4:1) system at 85 °C for 6–8 hours when an arylboronic acid pinacol ester is introduced at 1.08–1.12 eq, yet the moment dissolved oxygen exceeds 0.3 ppm, amino-group oxidation triggers a darkening of the reaction mass from pale yellow to deep amber within 20–30 minutes. Larger campaigns—above 80 kg input—employ subsurface nitrogen sparging through a sintered metal gas dispersion tube (pore size 10–16 µm) for 45 minutes before catalyst charging and maintain an overpressure of 0.2 bar throughout the coupling. Upon completion, residual palladium removal follows a trimercaptotriazine-functionalized silica plug (Si-TMT, 1.5 wt% relative to substrate) stirred at 60 °C for 3 hours, followed by hot filtration through a 0.45 µm PTFE membrane. The filtrate then undergoes solvent exchange to methanol for direct use in the next hydrogenation or deprotection step; distillation hold-up volumes are designed so that the pot temperature never exceeds 45 °C at 80 mbar, circumventing premature ester methanolysis that otherwise would convert 2–4% of the batch into the free acid, complicating downstream amide coupling stoichiometry.
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Methyl 2-amino-1,3-thiazole-5-carboxylate, systematically registered as CAS 32409-45-3 and assigned molecular formula C₅H₆N₂O₂S with a formula weight of 158.18 g·mol⁻¹, is a heterocyclic building block supplied as a pale‐yellow to off‐white crystalline powder. The compound crystallizes in a monoclinic space group and exhibits a melting endotherm onset at 167–169 °C by differential scanning calorimetry at 10 K·min⁻¹ under nitrogen, a characteristic that can be used as a binary identity check alongside infrared spectra featuring the ester carbonyl stretch at 1720 ± 5 cm⁻¹ and the primary amine symmetric deformation at 1620 cm⁻¹. Table 1 summarizes the release specifications applied to commercial lots manufactured under ISO 9001:2015-certified quality systems.
| Parameter | Method | Limit |
|---|---|---|
| Assay (anhydrous basis) | HPLC, area% at 254 nm | ≥ 98.0% |
| Water content | Karl Fischer (coulometric) | ≤ 0.5% w/w |
| Residual solvents | GC‑FID per USP ⟨467⟩ | Ethyl acetate ≤ 5000 ppm; heptane ≤ 500 ppm |
| Chloride (ion chromatography) | IC per EP 2.2.38 | ≤ 200 ppm |
| Sulfated ash | Ph. Eur. 2.4.14 | ≤ 0.1% |
| Appearance of solution (10% w/v in DMF) | Visual inspection against Ph. Eur. colour scale | Clear, not more coloured than reference solution Y6 |
The positional arrangement of the ester substituent relative to the endocyclic nitrogen and sulfur atoms markedly alters the electron‑withdrawing character at C‑5. In the 5‑carboxylate derivative, the carbonyl π‑system is conjugated with the thiazole ring’s π‑orbitals through the C=C bond at positions 4–5, reducing the partial positive charge on the ester carbon relative to the 4‑carboxylate, where the ester is directly attached to the electrophilic C‑4 adjacent to the ring nitrogen. This electronic modulation is manifested in comparative activation energies: when coupling with benzylamine in DMF catalyzed by 1.2 eq HOBt/EDCI, the 5‑carboxylate reaches 85% conversion after 12 h at ambient temperature, while the 4‑carboxylate analogue achieves 92% conversion under identical conditions, as tracked by inline ReactIR. Process chemists utilizing continuous‑flow tubular reactors (PFA coil, 1.0 mm ID, residence time 45 min) have observed that pre‑activating the 5‑carboxylate acid chloride with N‑methylimidazole shifts the amidation endpoint to 98% within 2 h, a strategy adopted when the weaker intrinsic electrophilicity would otherwise stall kilo‑lab campaigns.
In a kilo‑lab setting at a contract manufacturing organization, the ester‑to‑amide conversion of methyl 2‑amino‑1,3‑thiazole‑5‑carboxylate via the intermediate acid (saponified with LiOH in THF/water 3:1 at 0 °C) was repeatedly compromised by residual lithium carboxylate aggregates that precipitated during DMF solvent swaps. These sub‑micron particulates blinded the 0.5 µm inline PTFE filters of the continuous stirred‑tank reactor train, causing back‑pressure excursions beyond 3.5 bar. The mitigation—switching to aqueous KOH and performing the saponification at 5 °C while monitoring pH statically at 12.0 ± 0.2—eliminated the gel‑like precipitate and permitted uninterrupted 48‑hour campaigns at 2.0 kg·batch⁻¹. This is a direct consequence of the 5‑carboxylate’s tendency to form stable chelates with hard cations, a behaviour markedly less pronounced in the ethyl ester variant where the longer alkyl chain disrupts carboxylate bridging.
The 2‑amino substituent is prone to partial hydrogenolysis on supported palladium catalysts if the exotherm is not tightly managed. Using a 5% Pd/C (type 39, sulfided) loading of 2.5% w/w relative to substrate, hydrogen uptake profiles at 3.0 barg and 35 °C revealed a two‑stage process: a rapid initial uptake corresponding to imine reduction of a trace Schiff‑base impurity formed during storage, followed by a slower plateau region representing the main substrate, which remained unchanged as confirmed by UPLC‑MS. The critical operational boundary is the temperature: beyond 45 °C, ring‑opening by‑products (detected as a m/z +18 adduct) appear with an onset at 48 °C in ethyl acetate, limiting the safe processing window to 35–40 °C. In contrast, the 4‑carboxylate isomer exhibits an exotherm onset for ring degradation 8 °C lower (37 °C) under otherwise identical conditions, making the 5‑carboxylate the preferred scaffold when downstream steps require catalytic hydrogenation upstream of a final deprotection.
Agrochemical intermediates derived from this scaffold—particularly N‑aryl amides prepared via EDCI‑mediated coupling with fluorinated anilines—are used as key building blocks for experimental succinate dehydrogenase inhibitor (SDHI) fungicide candidates. Structure–activity exploration has focused on the 5‑ester because the carboxylic acid function, once liberated, can be repositioned to interact with the conserved arginine residue of the SDH enzyme without the steric penalty imposed by the 4‑ester regioisomer, which forces the amide bond vector into an unfavourable torsion angle of +28° relative to the inhibitor pharmacophore plane (measured by X‑ray co‑crystal structures in published patent literature). The outcome is a 10‑ to 15‑fold improvement in IC₅₀ against Zymoseptoria tritici for the 5‑regioisomer series, a differentiation that directly drives demand specifications at the contract synthesis level where isomer‑free material (< 0.3% 4‑carboxylate by HPLC) is contractually required.
Details on physicochemical distinctions between ester homologues are consolidated in Table 2. The data were generated using the same analytical protocols applied to production batches.| Property | Methyl ester | Ethyl ester | tert‑Butyl ester |
|---|---|---|---|
| Melting range (°C) | 167–169 | 148–150 | 122–124 (dec.) |
| Aqueous solubility (mg·L⁻¹, 25 °C, pH 6.8) | 3200 ± 150 | 1800 ± 100 | 420 ± 30 |
| Log P (octanol/water, shake‑flask) | 0.78 | 1.35 | 2.12 |
| Stability to acidic cleavage (HCl 2 N, dioxane, reflux) | Cleavage 98% in 6 h | Cleavage 95% in 8 h | Cleavage 100% in 2 h (with gas evolution) |
| Typical HPLC purity after recrystallization from toluene/MeOH | ≥ 98.5% | ≥ 99.0% | ≥ 97.5% |
Methyl 2‑amino‑1,3‑thiazole‑5‑carboxylate is stored in tightly sealed HDPE drums under nitrogen overlay; exposure to ambient humidity at RH > 60% for periods exceeding 48 h results in a water uptake of 0.8–1.2% w/w, which catalyzes ester hydrolysis during subsequent reactions performed in aprotic solvents. Karl Fischer titration should confirm ≤ 0.5% moisture before use in any palladium‑catalyzed cross‑coupling, as water contents above 0.7% suppress the turnover frequency of Pd(dba)₂/XPhos systems by approximately 40%, likely due to competitive hydration of the active catalyst species. Pharmaceutical customers filing drug master files under US FDA 21 CFR 314.420 routinely request a retest period of 12 months with storage at 2–8 °C, a practice supported by forced‑degradation studies showing < 0.2% total related substances after 12 months under these conditions.
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