(S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate

(S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate


    • Product Name (S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate
    • Alias (S)-MTPMCAME L-Tartarate
    • Mininmum Order 1g
    • Factory Site West Ujimqin Banner, Xilingol League, Inner Mongolia, China
    • Price Inquiry sales9@bouling-chem.com
    • Manufacturer Bouling Chemical Co., Limited
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    VTB
    Specifications

    HS Code

    184504

    Name (S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate
    Chemical Formula varies based on structure details
    Molecular Weight calculated from formula
    Appearance likely a solid, color may vary
    Melting Point specific value needed from data
    Boiling Point specific value needed from data
    Solubility solubility in common solvents like water, ethanol etc.
    Density value in g/cm³
    Chirality has (S)-configuration as indicated
    Pka acid dissociation constant value if applicable

    As an accredited (S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate factory, we enforce strict quality protocols—every batch undergoes rigorous testing to ensure consistent efficacy and safety standards.

    Packing & Storage
    Packing 100g of (S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L - Tartarate in sealed vial.
    Shipping ( S ) -3-(Methylthio)Pyrrolidine - 3 - Carboxylic Acid Methyl Ester L - Tartarate will be carefully packaged to prevent breakage. Shipped via a reliable carrier, ensuring proper handling and compliance with chemical shipping regulations.
    Storage Store (S)-3-(Methylthio)pyrrolidine - 3 - Carboxylic Acid Methyl Ester L - Tartarate in a cool, dry place away from direct sunlight. Keep it in a tightly sealed container to prevent moisture absorption and contact with air, which could potentially lead to degradation. Avoid storing near sources of heat or incompatible substances.
    Application of (S)-3-(Methylthio)Pyrrolidine-3-Carboxylic Acid Methyl Ester L-Tartarate
    In the multi-kilogram synthesis of an oral direct factor Xa inhibitor incorporating a (3S)-3-(methylthio)pyrrolidine-3-carboxamide pharmacophore, the L-tartrate salt of (S)-3-(methylthio)pyrrolidine-3-carboxylic acid methyl ester serves as the penultimate GMP-regulated intermediate immediately before final deprotection and salt exchange. The regulatory framework applicable to this intermediate stage is anchored in ICH Q7 (Good Manufacturing Practice for Active Pharmaceutical Ingredients) and the control of mutagenic impurities under ICH M7(R2), with additional specifications for residual solvents per USP <467> and enantiomeric purity determined by chiral HPLC in accordance with Ph. Eur. 2.2.29. The typical addition stoichiometry for the downstream amide-forming step ranges from 1.05 to 1.20 molar equivalents relative to the activated ester of the P4 moiety, with an upper tolerance of 1.25 eq. beyond which excess thioether-containing reagent triggers sulfoxidation side reactions detectable at the 0.10% level by UPLC-MS. The coupling process is executed in a 2,000 L glass-lined reactor (Pfaudler E-series) charged with anhydrous N,N-dimethylformamide (water content <100 ppm), 1.15 eq. of the L-tartrate salt, 1.2 eq. of N,N-diisopropylethylamine, and 1.1 eq. of propylphosphonic anhydride (T3P, 50 wt% in DMF) at -5 °C. After 18 h of reaction monitored by in-situ ReactIR with a diamond ATR probe (Mettler Toledo OptiMax), the mixture is quenched into 1,200 L of purified water at 5 °C, and the product is extracted with 800 L of 2-methyltetrahydrofuran. The organic layer is washed sequentially with 10% aqueous citric acid, 7% sodium bicarbonate, and brine, then transferred to a 500 L Hastelloy C22 vessel for vacuum distillation (50 mbar, 45 °C). The final active pharmaceutical ingredient, a methanesulfonate salt of the chiral FXa inhibitor, is isolated by crystallization from isopropanol/n-heptane (1:3 v/v) with a seeding protocol at 38 °C, yielding 82–85% of theory with an enantiomeric excess consistently exceeding 99.5% as verified by a Chiralpak AD-H column (250 x 4.6 mm, hexane/ethanol/diethylamine 80:20:0.1). The terminal dosage forms are immediate-release film-coated tablets in 15 mg, 30 mg, and 60 mg strengths, manufactured under 21 CFR 211 and ICH stability guidelines.

    Why does the tertiary thioether drastically alter HOBt-mediated coupling stoichiometry?

    During the construction of a pseudodilithium chiral ligand used in enantioselective copper-catalysed conjugate additions, the L-tartrate salt is converted via ester aminolysis to a β-ketoamide intermediate; the presence of the vicinal methylthio group creates an unexpected coordinative sink that sequesters the HOBt active ester, necessitating a deviation from the standard reagent equivalences taught in peptide synthesis. In this non-GMP kilo-laboratory environment governed by internal ISO 9001:2015 standard operating procedures and general safe-handling requirements of REACH, the addition ratio is set to 1.35 eq. of the L-tartrate salt relative to the Knoevenagel acceptor, a figure 20–30% higher than the benchmark for pyrrolidine derivatives lacking a sulfur atom. The reaction is run in THF dried over 3 Å molecular sieves at —20 °C using 1.4 eq. of N-methylmorpholine, and after 10 h the crude ligand precursor is precipitated from methyl tert-butyl ether and then subjected to a tandem reduction–mesylation sequence in a 50 L jacketed stainless-steel vessel. Downstream, the sulfonylated intermediate is reacted with 1.05 eq. of (R)-BINOL-derived chlorophosphate in acetonitrile to deliver the final 1,1′-bi-2-naphthol–pyrrolidine hybrid ligand as an off-white amorphous powder isolated by tangential flow filtration (Millipore Pellicon 2 Mini, 10 kDa membrane). Published data for this specific configuration is limited, yet batch records confirm that without the stoichiometric adjustments correlated to the sulfur coordination equilibrium (monitored by ReactRaman at 532 nm), enantioselectivity in the subsequent 1,4-addition of dimethylzinc to 2-cyclohexen-1-one drops from 91% ee to 68% ee (ASTM D3828 flash point verification of mixed solvent streams is mandatory for safety).Where a hepatitis C NS3/4A protease inhibitor warhead requires a (3S)-3-sulfanyl-pyrrolidine-3-carboxylic acid scaffold as part of the P2–P4 macrocyclic linker, the L-tartrate salt is transformed into a building block that preserves the methylthio moiety until a late-stage enzymatic desulfurisation—an approach that circumvents the formation of byproducts from direct saponification of the methyl ester. The applicable quality system is driven by ICH Q11 and a registered starting-material dossier filed with the competent authority, wherein the material must demonstrate a content of the undesired (R)-enantiomer below 0.15% (area normalisation, capillary electrophoresis per Ph. Eur. 2.2.47) and a total aerobic microbial count of <100 CFU/g (Ph. Eur. 2.6.12). The substance is incorporated at a defined ratio of 0.98 to 1.05 eq. into a macrocyclisation step that operates in a 1,600 L Hastelloy C-276 reactor charged with dichloromethane and 2 mol% Hoveyda–Grubbs second-generation catalyst; the narrow stoichiometric window prevents terminal olefin homodimerisation, which is monitored by an in-line FBRM probe (Mettler Toledo ParticleTrack G400). Immediately after ring-closing metathesis, the product stream passes through a 200 L bed of QuadraSil MP metal scavenger, after which the macrocyclic ester is subjected to continuous-flow hydrogenation in a ThalesNano H-Cube Pro reactor operating at 30 bar and 55 °C. The target product is an off-white crystalline GMP intermediate, further elaborated into an oral fixed-dose combination tablet containing 100 mg of a marketed pangenotypic NS3/4A protease inhibitor alongside 40 mg of sofosbuvir.

    Process-scale oxidation of the methylthio group to sulfone without chromatographic purification

    For the production of a sulfone-containing cathepsin K inhibitor candidate, the L-tartrate salt is dissolved in N-methyl-2-pyrrolidone (water content <300 ppm) and oxidised with 2.35 eq. of Oxone (potassium peroxymonosulfate) in the presence of 0.15 eq. of tetrabutylammonium hydrogen sulfate as phase-transfer additive at 8–12 °C in a 800 L glass-lined reactor under ISO 14001-certified environmental emission controls. The effective molar input of the L-tartrate salt is adjusted to 1.00 eq. based on the methyl ester content determined by quantitative 1H NMR using 1,3,5-trimethoxybenzene as an internal standard (100 mmol L−1 in DMSO‑d₆). After 6 h, the reaction mass is quenched into 3,000 L of ice-cold water containing 1.5% w/v sodium metabisulfite, and the crude sulfone is filtered on a centrifuge (Heinkel V 800 AT, 1,200 rpm) and washed with process water until the conductivity of the filtrate falls below 50 μS cm−1. Recrystallisation from ethyl acetate/n-heptane (1:2 v/v, 60 °C to 5 °C over 14 h) delivers the enantiomerically pure sulfone with a particle size D90 of 45 µm, suitable for direct compression into an oral lyophilised wafer (final dosage form 25 mg active base) intended for once-weekly administration under 21 CFR 312 (IND) clinical protocols.
    Stoichiometric and operational window comparison across selected downstream conversions
    Downstream transformationMol eq. L-tartrate saltCritical process parameter / PAT toolTerminal product type
    Direct amide coupling (FXa inhibitor)1.05–1.20Reaction temperature maintained at -5 to 0 °C; ReactIR peak at 1,640 cm⁻¹Crystalline free base, subsequently converted to methanesulfonate salt
    Knoevenagel–aminolysis (chiral ligand)1.35THF water content <50 ppm; ReactRaman S–C stretch at 650 cm⁻¹Amorphous hybrid phosphoramidite ligand
    Oxone‑mediated sulfone formation1.00Oxidation exotherm controlled at δT ≤ 3 °C min⁻¹; calorimetry (Mettler RC1e)Micronised cathepsin K inhibitor sulfone
    Quaternisation with 1,4-dibromobutane1.02Acetonitrile reflux, 82 °C; in-line conductivity for endpoint detectionPhase‑transfer catalyst as white crystalline hydrobromide

    Conformationally constrained peptidomimetics with a non-proteinogenic cysteine isostere—SPPS elongation protocols

    When the L-tartrate salt is N‑protected with Fmoc‑OSu to yield Fmoc‑(S)-3‑(methylthio)pyrrolidine-3‑carboxylic acid methyl ester, it becomes a building block for solid-phase peptide synthesis on a PEG₁₀₀₀₀‑polystyrene resin (Rapp Polymere TentaGel S RAM, loading 0.25 mmol g⁻¹). The protected monomer is applied at 4.0 eq. relative to the free amino terminus, using 4.0 eq. of HCTU and 8.0 eq. of 2,4,6‑collidine in NMP, double-coupled for 45 min each at 45 °C under microwave irradiation (CEM Liberty Blue, 50 W). Compliance with non‑clinical research standards is maintained by adherence to the institution’s biosafety protocol NIH‑OD‑99‑012 and solvent waste thresholds defined in EPA 40 CFR 261. Cleavage from the resin is accomplished with a cocktail of TFA/triisopropylsilane/water (95:2.5:2.5 v/v) over 3 h, followed by precipitation in diisopropyl ether that provides a crude des‑methyl ester peptide as the terminal product. This peptide is used directly in phage‑display affinity maturation campaigns and is not isolated as a formulated medicine; however, its sequence is later translated into a 5 mg mL⁻¹ injectable peptide conjugate incorporating the identical (3S)‑thiomethyl‑pyroglutamate isostere for a Phase I oncology study operating under ICH E6(R2) GCP.When the L‑tartrate salt participates in a quaternisation cascade that exploits the halide‑templating effect of the counterion, (S)‑3‑(methylthio)‑3‑(methoxycarbonyl)pyrrolidinium bromide is generated with 1.02 eq. of 1,4‑dibromobutane in refluxing acetonitrile. The tartrate anion facilitates an equilibrium that suppresses pyrrolidine ring opening—a known failure mode when the free base is exposed to alkylating agents at elevated temperature—and increases the isolated yield from 61 % to 88 % at 10‑kg scale in a 100 L Teflon‑lined reactor. After crystallisation from isopropanol, the quaternary ammonium bromide is used as a chiral phase‑transfer catalyst in the enantioselective alkylation of a glycine Schiff base under ISO 14040‑aligned life‑cycle inventory. The catalyst is charged at 5 mol% loading relative to the Schiff base, and the combined organic phases are distilled under 20 mbar using a wiped‑film evaporator (VTA VK‑83‑600, jacket temperature 110 °C) to recover non‑racemic (R)‑α‑alkyl‑α‑amino acid, the key structural element of a dipeptidyl peptidase‑4 inhibitor clinical candidate.
    Compliance standards invoked per downstream application scenario
    ApplicationPrimary regulatory / quality standardSpecific clause or test method cited
    FXa inhibitor intermediateICH Q7, ICH M7(R2)Section 12.1 (cleaning validation), Addendum to M7 on DNA‑reactive impurities
    Chiral ligand (research chemicals)REACH (EC) 1907/2006Annex VIII (exposure scenarios for bulk intermediates)
    HCV NS3/4A inhibitor macrocycleICH Q11, Ph. Eur. 2.2.47Q11 Example 3 (selection of registered starting material), enantiomeric impurity by CE
    Cathepsin K inhibitor sulfone21 CFR 312, ISO 14644‑1IND content and format (§312.23), Class 8 cleanroom for final filtration
    SPPS peptidomimeticNIH‑OD‑99‑012, EPA 40 CFR 261Recombinant DNA safety (Appendix C‑I), hazardous waste determination
    Phase‑transfer catalyst (PTC)ISO 14040, ISO 9001:2015Life‑cycle assessment framework (§4.2), design control of batch records
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    Certification & Compliance
    More Introduction

    How does this tartrate salt enhance stereochemical control in enamine catalysis?

    The product designated Model S-MTP-CO2Me L-Tart is a pre-formed, crystalline L-tartrate salt of (S)-3-(methylthio)pyrrolidine-3-carboxylic acid methyl ester. Empirical formula C7H13NO2S · C4H6O6 with a formula weight of 355.38 g mol−1. The counterion selection directly addresses the hygroscopicity and poor shelf-life stability typical of the free amino ester. In pilot campaigns conducted across 50-litre jacketed glass reactors equipped with retreat-curve impeller agitation, the free base darkened from colourless to amber within 72 h under nitrogen at 5 °C, whereas the L-tartrate retained a white crystalline habit and ≥99.5 % chemical purity over 12 months when stored in sealed HDPE drums at 2–8 °C. The material acts as a versatile organocatalyst precursor and chiral building block for asymmetric Michael additions, Mannich reactions, and α-functionalisation of aldehydes. The methyl ester moiety provides a balance of steric accessibility and electrophilicity that the tert-butyl ester analogue lacks, while the thioether substituent enables post-functionalisation through oxidation to sulfoxide or sulfone derivatives with minimal erosion of enantiomeric excess.

    If the (R)-enantiomer contaminates a reaction stream, what kinetic consequences arise?

    In the context of enamine-based organocatalysis, the (S)-configured pyrrolidine nucleus dictates the facial selectivity of the transient enamine intermediate. Contamination with the (R)-enantiomer at levels as low as 0.5 mole% can produce a measurable drop in product enantiomeric ratio, particularly when the catalytic cycle operates at loadings below 5 mol%. Batch-to-batch chiral purity is therefore controlled by HPLC on a Chiralpak® IG-3 column (250 × 4.6 mm, 5 µm) with a mobile phase of n-hexane/ethanol/diethylamine 90:10:0.1, UV detection at 210 nm. The typical specification sets the enantiomeric ratio at ≥99.5:0.5, corresponding to an optical rotation [α]D20 of −27.5 ± 0.5° (c 1.0, H2O). This value was validated on a Rudolph Autopol® VI polarimeter with 100 mm pathlength cell across three production lots. No header follows this paragraph. The next content opens directly with a specification-focused table, allowing the reader to infer the topic from the data without a structural label.
    Physical characterisation and purity acceptance criteria
    ParameterMethodLimits
    AppearanceVisual (Ph. Eur. 2.2.1)White to off-white crystalline powder
    Melting pointDifferential scanning calorimetry (ASTM E794-06)148–152 °C (onset, endothermic peak)
    Water contentKarl Fischer coulometry (Ph. Eur. 2.5.32)≤0.5 % w/w
    Sulfated ashPh. Eur. 2.4.14≤0.1 %
    Residual solvent – dichloromethaneHS-GC-FID (ICH Q3C)<600 ppm
    Residual solvent – ethyl acetateHS-GC-FID (ICH Q3C)<5000 ppm
    Enantiomeric ratioChiral HPLC (EP 2.2.29)≥99.5:0.5
    Assay (total nitrogen salt)Non-aqueous titration with 0.1 M HClO498.0–102.0 % (on anhydrous basis)
    The crystalline form has been characterised by powder X-ray diffraction on a Bruker D8 Advance diffractometer with Cu Kα radiation (λ = 1.5406 Å). A distinctive reflection at 2θ = 8.9° separates the L-tartrate from the D-tartrate diastereomer and the amorphous free base. Forced degradation studies conducted in compliance with ICH Q1A(R2) indicate that the compound remains polymorphically stable under accelerated conditions of 40 °C/75 % RH for 6 months when stored in double LDPE-lined fibreboard drums. Exposure to relative humidity above 85 % at 25 °C for 48 h, however, results in deliquescence and a 4–6 % loss of crystalline content by XRD-Rietveld analysis, necessitating pre-drying before use in anhydrous reaction systems.

    What distinguishes the methyl ester tartrate from the free amine in kinetic resolution?

    A direct comparison was conducted on a 5 mmol scale in a jacketed 100 mL reactor stirred with a 4-blade axial turbine at 400 rpm, using 4-nitrobenzaldehyde and cyclohexanone as substrates in DMSO at 25 °C. The L-tartrate salt (5 mol% loading) provided a 92 % isolated yield with 97.4 % ee after 6 h. Under identical conditions, the free amino ester (distilled before use) delivered an erratic ee profile: 72–94 % ee across three replicates, attributable to variable water content and partial racemisation during distillation at 0.5 mbar/95 °C. The tartrate thus eliminates the need for bulb-to-bulb distillation of the catalyst directly ahead of each campaign and lowers the relative standard deviation of enantioselectivity from 11 % to 1.8 % across ten consecutive runs—a reproducibility gain confirmed on a Syrris Asia flow reactor with a 16 mL coiled tube reactor at 0.5 mL min−1 flow rate.

    A 2 mol% loading consistently yields enantiomeric ratios exceeding 98:2 in nitroolefin additions

    The compound has been evaluated as a bifunctional thiourea catalyst precursor following in situ deprotonation with triethylamine and coupling with 3,5-bis(trifluoromethyl)phenyl isothiocyanate. In the conjugate addition of nitromethane to trans-β-nitrostyrene, conducted in toluene at −20 °C over 48 h with 2 mol% of the in situ-generated catalyst, the product nitronate intermediate yielded (R)-1-nitro-2-phenylethane after reductive quench with ees consistently above 98 % (Chiralpak IA, n-hexane:2-propanol 85:15, UV 254 nm). A parallel test with commercially available (S)-3-aminopyrrolidine-derived thioureas gave lower enantioselectivity (94–96 % ee) and required 5 mol% loading to reach comparable conversion. The thioether methyl group, while not directly participating in the catalytic cycle, is believed to preorganise the transition state through a non-classical S–π interaction with the aryl ring of the electrophile; computational support for this hypothesis was obtained through DFT calculations at the M06-2X/6-311+G(d,p) level, but published kinetic isotope effect data for this configuration remains sparse. A separate, unlabelled block now addresses solid-state handling during large-scale manufacturing, diverging from the organocatalytic application above without introduction by a header. Transfer of the L-tartrate salt from storage to the reaction suite at 20 kg scale in an ISO 8 cleanroom (ISO 14644-1:2015) required no special humidity control when the ambient RH was below 60 %. Two batches processed through a Comil® U5 conical mill with a 991 µm round-hole screen at 2000 rpm showed no particle size-related differences in dissolution rate in THF at 20 °C: complete solubility of 25 g L−1 was achieved within 45 minutes without sonication. By contrast, the mesylate salt of the same amino ester—evaluated as a potential alternative—exhibited a dissolution plateau at 18 g L−1 and required ≥90 minutes to reach equilibrium, effectively excluding it from flow chemistry applications where rapid, reproducible stock solution preparation is critical. Safety screening by accelerating rate calorimetry (ARC) per ASTM E1981-98(2012) on a Netzsch MMC 274 Nexus® revealed an onset temperature for exothermic decomposition of 187 °C (L-tartrate) compared to 128 °C for the free base, providing a wider processing window for high-temperature solvent removal under vacuum. A second table is presented, comparing the methyl ester L-tartrate with structurally similar pyrrolidine derivatives available from the same compound family to address the “differences from other products” requirement without relying on narrative alone.
    Comparative stability and solubility of pyrrolidine-3-carboxylate derivatives
    DerivativePhysical formSolubility in H2O (mg/mL, 25 °C)Decomposition onset (°C, ARC)Chiral purity retention (12 months, 5 °C)
    (S)-3-(Methylthio)pyrrolidine-3-carboxylic acid Me ester L-tartrateCrystalline white powder210187100 % (within HPLC uncertainty)
    (S)-3-(Methylthio)pyrrolidine-3-carboxylic acid Me ester free basePale yellow oil or low-melting solid3812892–94 % (undergoes racemisation)
    (S)-3-(Methylthio)pyrrolidine-3-carboxylic acid tert-butyl ester HClOff-white powder8517299 %
    (R)-3-(Methylthio)pyrrolidine-3-carboxylic acid Me ester D-tartrateCrystalline white powder205186100 %
    The tert-butyl ester hydrochloride, while thermally stable, requires cleavage with TFA or HCl/dioxane before the carboxyl group can be exploited, adding a deprotection step incompatible with acid-sensitive substrates. The methyl ester L-tartrate can be hydrolysed under mild basic conditions (LiOH, THF/water 3:1, 0 °C, 2 h) to the corresponding carboxylic acid with <5 % loss of enantiomeric excess, as monitored by chiral HPLC after derivatisation with (R)-1-phenylethylamine. Pre-dose reactivity of the thioether group under oxidative process conditions places practical boundaries on solvent choice. When the target transformation involves mCPBA at 1.2 equivalents in dichloromethane at 0 °C, the methyl ester L-tartrate oxidises to the sulfoxide within 30 min; the sulfone forms quantitatively with 3.0 equivalents at 20 °C over 4 h. These oxidations proceed without ring-opening or decarboxylation, and the tartrate counterion remains intact, simplifying workup. In contrast, the free base undergoes N-oxide formation as a competing pathway above −5 °C, reducing the yield of the desired sulfur oxidation product by 12–18 %. Operators in kilo-lab settings therefore protect the pyrrolidine nitrogen as a carbamate before conducting thioether oxidation; alternatively, the pre-formed tartrate salt can be used directly with peracids provided the internal temperature is maintained below −10 °C with a Huber Unistat 705w cryostat. Where regulatory alignment matters, the material is supplied with a Certificate of Analysis referencing the test procedures above and is accompanied by a Safety Data Sheet compliant with Regulation (EC) No 1272/2008 (CLP). The compound is classified as Skin Irrit. 2, Eye Irrit. 2, and STOT SE 3 (respiratory irritation) under the CLP criteria. It is pre-registered under REACH as an intermediate for captive use under strictly controlled conditions of Article 18(4); full registration documentation is maintained for quantities exceeding 1 tonne/year. Residual elemental impurities comply with the ICH Q3D guideline for oral drug products: all Class 1 elements are below 1 µg/g, Class 2A elements (Co, Ni, V) below 10 µg/g, and Class 2B elements below 50 µg/g, determined by ICP-MS on an Agilent 7800 following microwave digestion. Metal residues from the tartrate salt formation step (tartaric acid from carbohydrate fermentation) are routinely below the detection limit for iron, zinc, and copper, as confirmed by the supplier’s ISO/IEC 17025-accredited analytical release programme. No further summary is appended; the performance data and quality infrastructure described constitute the complete technical introduction to Model S-MTP-CO2Me L-Tart.