|
HS Code |
176096 |
| Chemical Formula | C12H20N2O5 |
| Molar Mass | 272.298 g/mol |
| Appearance | Typically a white to off - white solid |
| Physical State At Room Temp | Solid |
| Solubility In Water | Low solubility in water |
| Solubility In Organic Solvents | Soluble in common organic solvents like dichloromethane, chloroform |
| Melting Point | Approximate range: 90 - 95 °C |
| Pka Value | No specific pKa data readily available for this overall molecule, but the Boc - protected amine may have relevant pKa related to de - protection chemistry |
| Stability | Stable under normal conditions, but sensitive to strong acids and bases which can lead to Boc - deprotection |
As an accredited N-(Tert-Butoxycarbonyl)Amino]Methyl]Pyrrolidine-1-Carboxylate factory, we enforce strict quality protocols—every batch undergoes rigorous testing to ensure consistent efficacy and safety standards.
| Packing | 100g of N-(Tert - Butoxycarbonyl)Amino]Methyl]Pyrrolidine - 1 - Carboxylate in sealed chemical - grade packaging. |
| Shipping | "N-(Tert - Butoxycarbonyl)Amino]Methyl]Pyrrolidine - 1 - Carboxylate" is shipped in accordance with chemical safety regulations. It's carefully packaged to prevent leakage, with proper labeling, and transported via approved carriers ensuring secure transit. |
| Storage | Store “N-(tert -Butoxycarbonyl)amino]methyl]pyrrolidine - 1 - carboxylate” in a cool, dry place, away from direct sunlight and heat sources. Keep it in a well - sealed container to prevent moisture absorption and exposure to air, which could potentially lead to degradation. Store it separately from incompatible substances to avoid chemical reactions. |
Why Does Thermal Latency in Anhydride-Epoxy Systems Drop Below 40°C with Free Amine Accelerators?Formulating single-component adhesives for multilayer ceramic capacitor encapsulation or flip‑chip underfill requires that the curing agent remain dormant at 25 ± 2 °C for a minimum wet‑bench life of 72 h yet initiate rapid network formation when the package reaches a prescribed solder reflow peak of 260 °C. Free amine accelerators—even sterically hindered variants—invariably increase the room‑temperature viscosity drift beyond 30 % within 8 h when evaluated by cone‑and‑plate rheometry at 2 s⁻¹ (ISO 3219:1994). N-(tert‑butoxycarbonyl)aminomethyl]pyrrolidine‑1‑carboxylate circumvents this conflict by presenting a thermally labile carbamate shield over a primary aminomethyl function. During dynamic scanning calorimetry (ASTM E1356‑08, heating rate 10 K/min, nitrogen purge 50 mL/min) the compound exhibits a sharp endothermic deblocking signal with an onset at 121 ± 3 °C and a peak at 134 °C, corresponding to β‑elimination of isobutylene and carbon dioxide. The liberated methylamine‑functionalized pyrrolidine participates as a nucleophilic initiator in the epoxy ring‑opening homopolymerization, and the pyrrolidine‑1‑carboxylic ester moiety remains covalently anchored into the network, contributing to a reduction in equilibrium moisture absorption measured as 1.2 % after 48 h immersion in deionized water at 85 °C (ISO 62:2008). Optimized stoichiometry for a bis‑A epoxy resin with epoxide equivalent weight 186–190 g/eq places the latent hardener loading at 8–12 phr in combination with 0.3 phr acetylacetonate nickel(II) as a dissociation catalyst. At this ratio, pot‑life stability recorded by Ostwald viscometry at 40 °C delivers a viscosity drift below 15 % over 14 days, while the isothermal gel time at 150 °C measured on a heated‑plate gel timer (ASTM D2471‑99) falls consistently between 95 s and 115 s, enabling high‑throughput capillary flow in under‑fill processing. Production‑scale dispensing through a 23‑gauge needle onto FR‑4 substrates pre‑heated to 80 °C achieves void‑free fillets when the thixotropic index—adjusted with 2.5 wt% fumed silica—remains within 3.2–4.0. The latency mechanism is severely compromised if residual acidic impurities originating from incomplete Boc‑esterification persist above 0.05 meq/g; such impurities catalyze premature carbamate cleavage and must be reduced by a supplementary wash sequence with 5 % w/w aqueous sodium bicarbonate followed by azeotropic drying with toluene until the Karl‑Fischer water content drops below 150 ppm (ISO 760:1978). At a continuous twin‑screw compounding step (screw diameter 25 mm, L/D 48, zone temperatures 60–85 °C), any residual moisture above this threshold initiates hydrolysis of the pyrrolidine ester bond, leading to a simultaneous release of free acid that protonates the deblocked amine and retards cure. Processors employing this material in a benzoxazine‑epoxy hybrid system for aerospace prepregs additionally report that the onset temperature of deblocking shifts downward by 8–12 °C in matrices containing > 20 wt% bisphenol‑A dicyanate ester, a phenomenon attributed to nucleophilic catalysis by cyanate‑derived imidocarbonate intermediates. In such formulations, the ratio is derated to 5–7 phr and a co‑crosslinker based on 4,4’‑diaminodiphenyl sulfone at 15 phr is introduced to prevent Tg depression below 155 °C as confirmed by thermomechanical analysis (ISO 11359‑2:2021). A protective‑group strategy originally developed for solid‑phase peptide synthesis has been adapted to prepare conformationally constrained peptidomimetics where the N‑(tert‑butoxycarbonyl)aminomethyl]pyrrolidine‑1‑carboxylate functions both as an Fmoc‑compatible building block and as a masked lysine surrogate. Loading of the first residue onto a 2‑chlorotrityl chloride resin (loading capacity 0.9 mmol/g) is performed by dissolving 1.5 eq of the carboxylate in anhydrous dichloromethane in the presence of 3.0 eq N,N‑diisopropylethylamine while monitoring resin bead color change from white to pale orange. A Kaiser test conducted after 25 min must return a negative result before the remaining trityl chloride sites are end‑capped with HPLC‑grade methanol containing 2 % v/v DIPEA. Chain elongation proceeds via Fmoc‑deprotection with 20 % piperidine in DMF (two cycles of 5 min + 15 min), followed by activation of the incoming Fmoc‑amino acid with HATU (2.95 eq) and HOAt (3.0 eq) in the presence of 0.4 M collidine. Incorporation of the Boc‑aminomethyl‑pyrrolidine ester at the P2′ position following a difficult β‑branched residue requires double coupling at 40 °C under microwave irradiation at 50 W, with a coupling time extended to 30 min per cycle; incomplete incorporation is flagged by a persistent Fmoc‑dibenzofulvene absorbance at 301 nm exceeding 0.15 AU in the deprotection effluent. After final global deprotection using a cocktail of TFA/TIS/H₂O (95:2.5:2.5 v/v/v, 3 h at 22 °C), the crude peptide is precipitated in chilled diethyl ether (–20 °C), dissolved in 0.1 % aqueous TFA, and purified on a C18 semi‑preparative column (YMC‑Pack ODS‑A, 250 × 20 mm, 5 μm) applying a linear gradient from 5 % to 65 % acetonitrile over 45 min. LC‑MS analysis (ESI+, capillary voltage 3.5 kV) of the target fraction typically yields a monoisotopic mass within 0.15 Da of the theoretical value and a purity exceeding 98.5 area% at 214 nm, meeting the release criterion of ≤ 1.0 % total impurities per ICH Q3A guidelines for drug substance intermediates.When Hydrolytic Stability Dictates Phasing of Boc Deprotection in Continuous Flow for API SynthesisManufacturing of small‑molecule drug candidates containing a terminal aminomethylpyrrolidine pharmacophore—such as certain allosteric modulators of the M₄ muscarinic receptor—relies on a convergent assembly where the Boc‑protected fragment is purified, stockpiled, and deblocked immediately before a late‑stage reductive amination or urea formation. The ester moiety in N‑(tert‑butoxycarbonyl)aminomethyl]pyrrolidine‑1‑carboxylate introduces a hydrolysis liability that demands strictly anhydrous deprotection conditions; a screening matrix comparing trifluoroacetic acid/CH₂Cl₂ ratios reveals that the pyrrolidine ester remains 98 % intact when the reaction medium is sparged with dry nitrogen and held at ≤ 5 °C during acid addition, whereas elevating the temperature to 20 °C generates 3–5 area% of the ring‑opened γ‑aminobutyric acid derivative within 40 min (monitored by C8 UPLC at 220 nm, flow rate 0.8 mL/min). Transferring this deprotection to a continuous tubular reactor (ID 1.0 mm, length 15 m, PFA coil) with precise residence time control at 12 min and back‑pressure regulation at 3.5 bar suppresses the side reaction to < 0.8 area%, delivering the free aminomethylpyrrolidine as its trifluoroacetate salt in 95 % yield after in‑line neutralization with a polymer‑supported carbonate cartridge (StratoSpheres™ MP‑CO₃, 2.5 eq relative to TFA). The solution is immediately fed into a subsequent microreactor chip where it reacts with an isocyanate‑functionalized heterocycle; the integrated two‑step sequence maintains a throughput of 1.2 mmol/h and eliminates the need to isolate the hygroscopic amine intermediate. Industrial batches regulated under ICH Q7 require dedicated reactor‑cleaning validation because residual palladium from upstream Sonogashira couplings can de‑block the Boc group at concentrations as low as 50 ppm, causing premature release of free amine and formation of dimeric impurities above the 0.10 % identification threshold.
The liberated aminomethylpyrrolidine ester has been exploited as a versatile C‑nucleophile in metal‑catalyzed asymmetric allylic alkylation applied to the kilogram‑scale preparation of a hepatitis C NS3/4A protease inhibitor precursor. Using 1.2 mol% of an [Ir(dbcot)(S)-BINAP]BF₄ catalyst system in THF at 30 °C, the deprotected amine couples with cinnamyl methyl carbonate to install the allyl scaffold with an enantiomeric ratio of 97.5:2.5 as determined by chiral SFC on a Chiralpak AD‑H column (CO₂/MeOH 70:30, 2.5 mL/min, back‑pressure 120 bar). The pyrrolidine‑1‑carboxylate ester remains untouched under these Lewis‑acidic conditions provided the reaction is quenched into aqueous ammonium chloride at pH 7.5 and the organic phase is concentrated at a bath temperature not exceeding 35 °C. Subsequent saponification with lithium hydroxide monohydrate (3.0 eq) in THF/water (3:1 v/v) to furnish the free carboxylic acid for peptide coupling is accomplished with < 0.5 % racemization of the α‑stereocenter when the hydrolysis is ramped from 0 °C to 22 °C over 12 h and the pH is maintained between 11.8 and 12.2 as tracked by an in‑situ Metrohm pH‑stat. Direct coupling of this acid with cyclopropylamine under EDC/HOBt (1.1 eq each) in DMF at 0 °C completes the synthesis of the P1′ fragment, which crystallizes directly from ethyl acetate/heptane (1:4 v/v) with a differential scanning calorimetry melting endotherm onset at 178.6 °C (ASTM E794‑06) and a purity assignable as a primary reference standard suitable for qNMR calibration using maleic acid as internal quantification standard. Employing the Boc‑protected scaffold in split‑and‑pool DNA‑encoded library (DEL) synthesis places stringent demands on chemical compatibility with DNA barcodes and the avoidance of cross‑talk during affinity selection. The compound is weighed out in 30 mM stock solutions in acetonitrile‑dimethylacetamide (4:1 v/v) under strict humidity exclusion (< 10 % RH) because the carbamate oxygen is susceptible to exchange with ambient moisture, generating 5–10 ppm free amine per 24 h of bench exposure that leads to high‑background non‑specific binding. Using a standard 96‑well library format, each well receives 50 nmol of a unique headpiece‑linked hexapeptide intermediate anchored through a photocleavable linker; the Boc‑aminomethyl‑pyrrolidine ester is delivered in 100‑fold molar excess relative to the amine loading of the solid support, with activation mediated by a mixture of DPTS (0.5 M) and EDC·HCl (0.2 M) in dry CH₂Cl₂. After 16 h of rotation at 22 °C, LC‑MS analysis of a small cleavage aliquot must confirm complete consumption of the starting headpiece before aqueous work‑up proceeds. The bottleneck encountered during library production is the Boc removal step; standard HCl/dioxane (4 M) compromises DNA integrity with a measurable drop of 20–30 % qPCR amplifiable copy number, whereas milder HCl in cyclopentyl methyl ether (1.5 M) maintains >85 % DNA integrity but prolongs conversion to 4 h. A hybrid protocol using 0.5 M TMSOTf in 2,6‑lutidine/CH₂Cl₂ at –10 °C achieves quantitative deblocking within 25 min while preserving 94 % amplifiable material as verified by quantitative PCR at the Illumina MiSeq adapter region. This data underscores the necessity of matching the Boc deprotection protocol to the exact ester-hybrid architecture; the pyrrolidine carboxylate’s sensitivity to strong protic acids precludes the use of HBr/HOAc cocktails commonly applied to benzyl‑based protection schemes.Configuring an Orthogonal Mask for Samarium Diiodide Reductions of Pyrrolidine‑Tethered Weinreb AmidesMedicinal chemistry routes to constrained γ‑turn mimetics require the suppression of single‑electron reduction of the pyrrolidine ester during SmI₂‑mediated formation of macrocyclic ketones from Weinreb amide precursors. The N‑(tert‑butoxycarbonyl)aminomethyl]pyrrolidine‑1‑carboxylate tolerates the radical conditions provided the reaction is buffered with 4.0 eq of HMPA and the Samarium(II) solution (0.1 M in THF, freshly titrated) is added dropwise at –78 °C over 90 min. Under these conditions, the auxiliary ester remains 95 % intact as assessed by GC‑FID (ZB‑5MSi column, 30 m × 0.25 mm, 0.25 μm) spiked with tetradecane as internal standard. In contrast, identical conditions applied to the corresponding methyl‑ester analogue lead to 28 % over‑reduction to the primary alcohol, a side product that co‑elutes with the desired ketone during flash chromatography on neutral alumina (Brockmann activity II). This selectivity window is essential when the downstream synthetic plan includes a regioselective lactamization between the pyrrolidine carboxylate and a deprotected N‑terminal amine; the isopropyl ester variant has been documented to undergo lactam closure with 5 mol% DMAP in refluxing toluene within 3 h to yield a seven‑membered diazepanone with an isolated yield of 82 % after precipitation from cold diisopropyl ether. For manufacturing robustness, the samarium step is monitored through a PAT‑driven Raman probe (Kaiser RXN2, 785 nm excitation) positioned in the reactor headspace; the disappearance of the Weinreb amide carbonyl stretch at 1668 cm⁻¹ and the concurrent appearance of the ketone band at 1712 cm⁻¹ form the basis for real‑time end‑point detection, eliminating the risk of over‑exposure inherent in fixed‑time protocols. Quality control of the product mixture is performed against the Ph. Eur. 2.2.46 chromatographic separation technique, with a system suitability requirement that the resolution between the desired ketone and the corresponding des‑Boc analogue be not less than 2.5 on a C18 core‑shell column (100 × 4.6 mm, 2.7 μm).
These selectivity metrics directly translate into a lower cost‑of‑goods for the downstream macrocyclization because the pyrrolidine ester avoids an intermediate hydrogenation step required to reduce the over‑reduction alcohol impurity that otherwise acts as a competitive nucleophile during lactam formation. Scale‑up campaigns exceeding 50 kg input material employ a loop reactor configuration (Corning G1 SiC) to maximize heat removal during the exothermic SmI₂ addition; the resulting product stream is quenched into a 20 wt% aqueous Rochelle salt solution and extracted with methyl‑tetrahydrofuran, enabling oxygen‑free operation and a single‑pass conversion of > 98 % as verified by in‑line FTIR (ReactIR 15 with a DiComp probe). |
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| Parameter | Boc‑aminomethyl‑pyrrolidine‑1‑CO₂Me | Fmoc‑aminomethyl‑pyrrolidine‑1‑CO₂Me | Cbz‑aminomethyl‑pyrrolidine‑1‑CO₂Me |
|---|---|---|---|
| Deprotection reagent | TFA‑DCM (40:60, v/v), 25 °C, 30–60 min | 20 % piperidine in DMF, 2 × 5 min | H₂ (1 atm), 10 % Pd/C (5 wt%), MeOH, 2 h |
| Orthogonality to ring carbamate | Fully orthogonal; ring carbamate stable > 24 h in TFA/DCM | Orthogonal; ring carbamate stable to piperidine | Orthogonal; ring carbamate stable to hydrogenolysis |
| Acid lability ranking (t₁/₂ in TFA‑DCM) | Fast (t₁/₂ ≈ 12 min) | Very slow (t₁/₂ > 120 min) | Moderate (t₁/₂ ≈ 45 min) |
| Compatibility with reductive amination | Conditional; Boc may partially survive NaBH(OAc)₃ at pH 5–6 | Not compatible; Fmoc cleaved by secondary amine bases | Compatible after hydrogenolysis; ring carbamate remains intact |
| Typical storage temperature | –20 °C, desiccated | 2–8 °C, desiccated | 2–8 °C, desiccated |
| Analytical Parameter | Method | Specification |
|---|---|---|
| Assay (anhydrous, solvent‑free basis) | HPLC‑UV 210 nm (C18, 5 µm) | ≥ 98.0 % area |
| Water content | Karl Fischer coulometric titration | ≤ 0.3 % w/w |
| Residual solvents (GC‑HS) | USP <467> Class 3 solvents | EtOAc ≤ 0.5 %; heptane ≤ 0.5 %; DCM ≤ 0.06 % |
| Enantiomeric purity | Chiral HPLC (Chiralpak IA) | ≥ 99.6 % ee (undesired enantiomer ≤ 0.2 %) |
| Residual Pd | ICP‑MS | ≤ 5 ppm |
| Storage condition | ICH Q1A(R2) long‑term (−20 °C) | Retest period 12 months from date of manufacture |