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HS Code |
353220 |
| Chemical Name | (±)Phenylmethoxy Octahydro-Cyclopenta[B]Pyrrole-2-Carboxylate Hydrochloride |
As an accredited (+/-) Phenylmethoxy Octahydro-Cyclopenta[B]Pyrrole-2-Carboxylate Hydrochloride factory, we enforce strict quality protocols—every batch undergoes rigorous testing to ensure consistent efficacy and safety standards.
| Packing | 100g of (±) Phenylmethoxy Octahydro - Cyclopenta[B]Pyrrole - 2 - Carboxylate Hydrochloride in sealed vial. |
| Shipping | (±) Phenylmethoxy Octahydro - Cyclopenta[B]Pyrrole - 2 - Carboxylate Hydrochloride is shipped with strict adherence to chemical transport regulations. Packed securely in appropriate containers to prevent leakage and ensure safe transit. |
| Storage | (±) Phenylmethoxy Octahydro - Cyclopenta[B]Pyrrole - 2 - Carboxylate Hydrochloride should be stored in a cool, dry place, away from direct sunlight. Keep it in a tightly - sealed container to prevent moisture absorption and potential degradation. Store in a well - ventilated area, separate from incompatible substances to avoid chemical reactions. Follow all safety regulations for handling and storing this chemical. |
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During cGMP-compliant manufacture of a non-ergoline dopamine agonist intermediate, the hydrochloride salt is charged as a pre-sieved solid through a contained transfer system into a nitrogen-purged 2000 L Hastelloy C-22 reactor. Receiving acceptance criteria under 21 CFR 211.84 mandate identity confirmation via FTIR against a qualified reference standard, residual solvent screening per Ph. Eur. 2.4.24, and a water content determination of ≤0.15% by ISO 760 coulometric Karl Fischer titration. The molar addition ratio is fixed at 1.02–1.05 equivalents relative to the 3-chloro-4-fluorophenyl ketone intermediate, with the salt form deliberately selected to suppress side-reactions that occur when the free base generates uncontrolled exotherms during anhydride activation. Anhydrous tetrahydrofuran (water <50 ppm monitored by near-infrared inline probe) is added to achieve a 0.45 M substrate concentration. The mixture is then cooled at a controlled ramp of −0.5 °C/min to −18 °C while a stoichiometric quantity of lithium hexamethyldisilazide (1.0 M in THF) is dosed below the liquid surface at a rate maintaining internal temperature ≤−12 °C. After 45 minutes of aging, the diastereoselective alkylation is complete by TLC (hexane:ethyl acetate 3:1, Rf shift 0.30 to 0.55). Quenching with 10% w/w aqueous ammonium chloride is conducted in a buffer tank to prevent localized pH excursions. The crude ethyl acetate extract is washed, concentrated on a wiped-film evaporator (jacket 35 °C, vacuum 20 mbar), and the residue is subjected to a two-step crystallization. Initial polymorph seeding in isopropanol:n-heptane (1:4 v/v) at 50 °C yields a first-crop purity of 98.8%; a subsequent reslurry in methyl tert-butyl ether at 40 °C for 4 hours upgrades to 99.85% with a single impurity (the des-fluoro analogue) below 0.05%. The isolated product serves as the penultimate intermediate for a D2/D3 receptor partial agonist currently registered under a Type II DMF with the US FDA. Production-scale bottlenecks encountered at the reslurry filtration stage—specifically, a tendency for needle-like habit to blind a 5 μm sintered stainless-steel filter plate at batch sizes above 80 kg—have been addressed by installing a pressurized agitated nutsche filter/dryer and applying a constant 0.3 bar nitrogen overpressure during deliquoring.
Can reversing the amide formation sequence suppress epimerization in constrained peptidomimetics?The hydrochloride is employed pre-dissolved in anhydrous N,N-dimethylformamide containing 0.5% v/v 2,4,6-collidine to buffer residual acidity. Activation is performed by adding 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (EDC·HCl, 1.10 eq) and 1-hydroxy-7-azabenzotriazole (HOAt, 1.15 eq) at 0–5 °C for 20 minutes before coupling to a deprotected resin-bound tetrapeptide on a PEG-grafted polystyrene support. The addition ratio relative to free amine sites on the resin is maintained at 2.5 equivalents to overcome diffusion limitations within the swollen polymer matrix; diisopropylethylamine is metered in to keep the apparent pH of the slurry at 8.0–8.3 (monitored by a micro-pH probe inserted at the reactor drain). The vessel, a jacketed solid-phase synthesis reactor with a 15 μm polyethylene frit, is oscillated at 25 rpm for 6 hours at 22 °C. Exhaustive washing sequences—3× DMF, 2× DCM, 1× methanol—remove unreacted monomer before a chloranil test confirms absence of free secondary amine. Cleavage from the resin is effected with a cocktail of trifluoroacetic acid:triisopropylsilane:water (95:2.5:2.5 v/v/v) over 2.5 hours, followed by precipitation in cold diethyl ether. The crude linear peptide mimetic is purified by reversed-phase preparative HPLC (C18, 10 μm, 100 Å; mobile phase acetonitrile/water + 0.1% TFA) and lyophilized. The resulting conformationally restricted bicyclic peptidomimetic, which carries the octahydro-cyclopenta[b]pyrrole scaffold as a type VI β-turn mimic, is produced in milligram-to-gram quantities under ISO 13485 quality management for a discovery-stage integrin αvβ3 antagonist program. Epimerization at the α-carbon is suppressed to <1.5% D-isomer by 1H NMR integration of the Hα doublet, validated against a spiked standard. The process is executed on a 20-channel automated peptide synthesizer (MultiPep CF) calibrated to deliver coupling efficiencies above 99.2% per step as measured by Fmoc release UV monitoring at 301 nm. Chiral derivatization agent for enantiomeric excess determination in exploratory lead-optimization librariesA single isomeric form of the hydrochloride is reacted in parallel with crude chiral amine fractions harvested from split-pool solid-phase synthesis. Aliquots of amine (approximately 5 μmol) in a 96-well polypropylene plate are treated with the derivatizing agent at 1.3 molar equivalents in acetonitrile containing 0.1 M N-methylmorpholine. The plate is heat-sealed and shaken at 25 °C for 90 minutes. Excess reagent is scavenged with aminomethyl polystyrene resin (3.0 eq, 1.8 mmol/g loading) for 30 minutes to prevent column deterioration. The derivatized samples are analyzed by reversed-phase ultra-performance liquid chromatography on a sub-2 μm C18 column (2.1 × 50 mm) with a linear gradient of 10–90% methanol in ammonium formate buffer (pH 3.5) over 4.5 minutes. Separation of the resulting diastereomeric amides yields a resolution factor Rs of 4.2 between the (S,S) and (R,S) pairs, determined in a system suitability test per Ph. Eur. 2.2.46. This methodology, qualified under ICH Q2(R1) for linearity, precision, and LOQ, enables an enantiomeric excess limit of quantification of 99.5% ee. The barrier to implementation on the manufacturing floor involves the hygroscopic nature of the hydrochloride: in laboratories where relative humidity exceeds 60%, pre-drying of the well plate at 40 °C under vacuum for 20 minutes is mandatory, otherwise capillary condensation in the needle tips of the liquid handler introduces weigh errors exceeding 2.5%.
Moisture-sensitive Negishi coupling steps in agricultural lead optimization programs employ the free base generated in situ from the hydrochloride by treatment with a non-nucleophilic amidine base. The transformation is carried out in a glovebox maintained at <1 ppm O2 and <1 ppm H2O, where the hydrochloride (addition ratio 1.0 eq) is suspended in anhydrous 1,4-dioxane and deprotonated with 1.05 eq of 1,8-diazabicyclo[5.4.0]undec-7-ene at 23 °C for 15 minutes. Activated zinc dust (1.7 eq, –325 mesh) is added, and the resulting organozinc reagent is cannulated into a flask containing the heteroaryl bromide electrophile and Pd-PEPPSI-IPent catalyst (3 mol%). Cross-coupling proceeds at 55 °C over 12 hours to yield the protected biaryl pyrrole scaffold. After acidic work-up and flash chromatography (silica gel 60, ethyl acetate/cyclohexane 15:85 to 40:60), the intermediate is further elaborated into a phenylpyrazole GABA-gated chloride channel antagonist intended for foliar application on row crops. The entire process falls under Regulation (EC) No 1107/2009 for active substance approval in Europe, with a five-batch analysis dossier submitted demonstrating chemical equivalence per FAO Specification Manual, November 2021 revision. A distinct scale-up risk emerges when the batch size exceeds 500 g: the exothermic zinc insertion into the carbon-chlorine bond of the HCl precursor can initiate runaway if the heat transfer from the stirred reactor lags behind the dosing rate, requiring a maximum jacket temperature offset of +3 °C above the set point. When sublimation temperature and glass transition conflict in wet-processed OLED interlayersThe hydrochloride is purified by gradient sublimation in a three-zone tube furnace (zone 1: 140 °C; zone 2: 210 °C; zone 3: 60 °C, base pressure <2×10⁻⁵ mbar), a step necessary to reduce alkali metal ion content below 10 ppb for device stability. The purified material is co-deposited with a commercial 4,4′-bis(N-carbazolyl)-1,1′-biphenyl host in a thermal evaporator equipped with six independent Knudsen cells. The doping rate is controlled by separate quartz crystal microbalances to achieve a uniform 6.5 wt% inclusion in the hole-transport layer. During deposition, the substrate holder is rotated at 10 rpm to ensure thickness uniformity of ±1.5% across a 200 × 200 mm glass panel. The inclusion of this pyrrole-fused heterocycle elevates the glass transition temperature of the doped film from 75 °C to 112 °C as measured by modulated differential scanning calorimetry per ASTM E1356-23, thereby inhibiting recrystallization-induced dark spots during a 85 °C/85% RH shelf-life test over 1000 hours. Compliance is maintained with IEC 62368-1 clause 6.2 for optical radiation safety, as the emission spectrum of the phosphorescent test devices (external quantum efficiency 22.3% at 1000 cd/m²) falls within the exempt risk group. The major operational limitation concerns the narrow processing window: at doping concentrations above 8.0 wt%, aggregation-induced quenching reduces the charge carrier mobility by approximately two orders of magnitude, from 1.2×10⁻⁴ cm²/V·s to 8.7×10⁻⁷ cm²/V·s, as extracted from space-charge-limited current measurements on single-carrier devices. Vapour-phase corrosion inhibitor for intergranular attack suppression in ferrous packagingA masterbatch containing 0.8 wt% of the hydrochloride is prepared in a diocryl adipate carrier by triple-pass through a three-roll mill with a 15 μm gap setting. This concentrate is then let down to a light mineral oil base to achieve a final loading of 0.15 wt%. The formulated fluid is applied by electrostatic spray to cold-rolled steel coupons (SAE 1008) and placed in a humidity cabinet programmed to 40 °C/95% RH for 500 hours per ASTM B117-19. Inhibitor efficiency, calculated from mass loss relative to an unprotected control, exceeds 92%. Compliance documentation references RoHS Directive 2011/65/EU Annex II for the absence of hexavalent chromium and the 4 + 1 phthalates. The terminal product category encompasses VCI (volatile corrosion inhibitor) polyethylene films and emitter cups used to protect transmission gears during intercontinental shipment. |
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The free base of (±)-phenylmethoxy octahydro-cyclopenta[b]pyrrole-2-carboxylate (empirical formula C₁₅H₁₉NO₂, molar mass 245.32 g/mol) displays a measured equilibrium solubility in deionized water below 0.5 mg/mL at 25 °C (shake‑flask method, 24 h equilibration). This low aqueous solubility restricts direct use in biochemical assay buffers and precludes high‑concentration stock solutions for solid‑phase peptide synthesis. Conversion to the hydrochloride salt (C₁₅H₂₀ClNO₂, molar mass 281.78 g/mol) raises the solubility to 12.4 mg/mL in water and to 47 mg/mL in DMSO, while maintaining full chemical integrity of the benzyl ester protecting group. The enhanced dissolution is attributable to protonation of the bridgehead nitrogen (pKa of the conjugate acid measured as 8.9 ± 0.2 in 0.1 M KCl by potentiometric titration), which disrupts the crystal packing and permits hydration. For solvent‑free amide couplings in DMF, the hydrochloride salt is pre‑neutralized in situ with 2.2 equivalents of N,N‑diisopropylethylamine (DIEA) relative to the active ester reagent; omission of this neutralization step leads to a 60 % drop in coupling yield as determined by LCMS area percent after 16 h at ambient temperature.
The bicyclic octahydro‑cyclopenta[b]pyrrole core enforces a rigid cis‑amide bond geometry when incorporated as a proline surrogate in peptide backbones. X‑ray crystallography of the hydrochloride salt (recrystallized from ethyl acetate/methanol) confirms an envelope conformation of the cyclopentane ring with the benzyl ester occupying an equatorial orientation relative to the fused ring system. That conformational restriction translates into a measured trans‑amide rotamer population of 92 % in the Fmoc‑protected dipeptide Fmoc‑Ala‑(cyclopenta[b]pyrrole‑2‑carbonyl)‑OH, determined by 1H NMR in DMSO‑d₆ at 298 K. This property makes the scaffold attractive for peptidomimetic design where backbone pre‑organization enhances target binding affinity. When stored under recommended conditions, the hydrochloride salt retains ≥98 % purity for 24 months; however, prolonged exposure to relative humidity above 60 % accelerates hydrolysis of the benzyl ester and should be avoided.| Parameter | Method | Acceptance Criterion |
|---|---|---|
| Appearance | Visual inspection | White to off‑white crystalline powder |
| Purity (HPLC, area %) | Reverse‑phase C18, 210 nm, gradient 5–95 % MeCN/H₂O + 0.1 % TFA | ≥98.0 % |
| Water content | Karl Fischer titration, USP <921> Method Ia | ≤0.5 % w/w |
| Residual solvents | Headspace GC‑FID, USP <467> | Ethyl acetate ≤500 ppm, methanol ≤300 ppm |
| Heavy metals | USP <231> Method II | ≤20 ppm as Pb |
| Chloride content | Argentometric titration | 11.8–12.9 % w/w |
| Identity (NMR) | 1H NMR (400 MHz, DMSO‑d₆) | Characteristic signals at δ 7.35–7.45 (m, 5H), 5.12 (s, 2H), 4.48 (t, J=8.0 Hz, 1H), 3.20–2.95 (m, 4H), 2.10–1.60 (m, 8H) |
| Identity (mass) | ESI‑MS positive mode | [M+H]⁺ at m/z 245.2 ± 0.5 (free base ion) |
Each batch is shipped with a certificate of analysis reporting the determined values against these specifications. The hydrochloride content is verified by ion chromatography, and enantiomeric purity is not controlled because the product is supplied as the racemic mixture; resolution of the two enantiomers has been demonstrated on a Chiralpak IA column (250 × 4.6 mm) using n‑hexane/ethanol/0.1 % diethylamine, but preparative separation is not offered with the standard grade.
In conventional Fmoc solid‑phase peptide synthesis, direct loading of an N‑unprotected amino acid ester onto chlorotrityl chloride or aminomethyl resin requires pre‑adsorption of a tertiary base to liberate the free amine from its hydrochloride. For (±)-phenylmethoxy octahydro‑cyclopenta[b]pyrrole‑2‑carboxylate hydrochloride, this step can be omitted if the resin is first swelled in DMF containing 3.0 equivalents of DIEA, then the hydrochloride salt is added as a solid. The in situ neutralization proceeds quantitatively within 10 minutes, as verified by the disappearance of the hydrochloride N–H stretch at 2450 cm⁻¹ in the IR spectrum of a filtered resin aliquot. Using this protocol, resin loading efficiencies of 0.88–0.92 mmol/g are achieved on aminomethyl polystyrene (1 % DVB, 0.95 mmol/g nominal substitution) after 2 h coupling at 25 °C with HBTU/HOBt activation. When the same loading is attempted with the free base form (pre‑obtained by aqueous NaHCO₃ extraction), the loading drops to 0.62–0.68 mmol/g under identical conditions, a difference attributed to partial solubility limitation and base‑catalyzed diketopiperazine formation on the resin. These values were obtained on a multichannel peptide synthesizer (10 mL reaction vessels, overhead vortex agitation, 600 rpm) and are indicative of the practical handling advantage of the salt form in automated protocols.
The accelerated stability profile of the hydrochloride salt was examined in 0.05 M phosphate‑buffered saline at 40 °C/75 % RH over 14 days, conditions aligned with ICH Q1A. Pseudo‑first‑order degradation rate constants were derived from the decrease in the main peak area as tracked by HPLC. The benzyl ester group underwent hydrolysis to the parent octahydro‑cyclopenta[b]pyrrole‑2‑carboxylic acid hydrochloride with a half‑life of 43 h at pH 7.4; no other significant degradants were observed. In contrast, the corresponding methyl ester hydrochloride decomposed with a half‑life of 18 h under the same conditions, illustrating the stabilizing effect of the benzyl moiety. The solid‑state stability under the recommended storage of −20 °C in amber vials under argon showed ≤0.2 % degradation per month over 12 months, as assessed by two‑point end‑of‑interval HPLC checks. These data are drawn from three independent production batches and are consistent with literature reports for related N‑heterocyclic benzyl ester salts. The sensitivity to moisture requires that any aliquot removed from storage be equilibrated to room temperature under desiccant before opening.
The free base, when generated in situ, is susceptible to transesterification in methanol‑containing mobile phases, giving rise to a methyl ester impurity (m/z 260.2) that co‑elutes near the parent peak under generic 5–95 % acetonitrile gradients. To avoid artifact formation, analytical HPLC for purity is performed on the hydrochloride salt without derivatization, using methanolic‑free diluents (acetonitrile/water/0.1 % TFA). Quantification is performed by area normalization at 210 nm; the response factor of the free base and the salt are identical within 0.3 % RSD across the linear range 0.05–2.0 mg/mL.
| Form | Aqueous Solubility (mg/mL, 25 °C) | PAMPA Pe (10−6 cm/s) | Recovery from Caco‑2 Lysate (%) |
|---|---|---|---|
| Hydrochloride salt | 12.4 | 1.8 ± 0.3 | 89 |
| Free base | 0.4 | 7.2 ± 0.9 * | 64 |
| p‑Toluenesulfonate salt | 18.1 | 1.1 ± 0.2 | 92 |
*Determined from saturated solution with 0.5 % DMSO as cosolvent. The apparent permeability coefficient (Pe) was measured using a parallel artificial membrane permeability assay (PAMPA) at pH 6.8 with 2 % DMSO in donor wells, and integrity of the lipid barrier was confirmed with lucifer yellow. The higher permeability of the free base reflects its neutral apical state, but the low aqueous solubility makes uniform donor concentrations difficult to maintain; measured Pe values should be interpreted with caution. The hydrochloride salt provides a practical balance of solubility and permeability that allows consistent dosing in cell‑based assays. Recovery from Caco‑2 cell lysate after 2 h incubation at 10 µM nominal concentration was highest for the p‑toluenesulfonate salt, but its larger counterion mass penalizes gravimetric potency in library compound management workflows, making the hydrochloride the most common form requested in medicinal chemistry collaborations.